Publications of Kirsten I. Bos

Knauf, S.; Gogarten, J. F.; Schuenemann, V. J.; Nys, D.; M., H.; Düx, A.; Strouhal, M.; Mikalová, L.; Bos, K. I.; Armstrong, R. et al.; Batamuzi, E. K.; Chuma, I. S.; Davoust, B.; Diatta, G.; Fyumagwa, R. D.; Kazwala, R. R.; Keyyu, J. D.; Lejora, I. A. V.; Levasseur, A.; Liu, H.; Mayhew, M. A.; Mediannikov, O.; Raoult, D.; Wittig, R. M.; Roos, C.; Leendertz, F. H.; Šmajs, D.; Nieselt, K.; Krause, J.; Calvignac-Spencer, S.: Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue. Emerging Microbes & Infections 7, 157 (2018)

Mann, A.; Sabin, S.; Ziesemer, K.; Vågene, Å. J.; Schroeder, H.; Ozga, A. T.; Sankaranarayanan, K.; Hofman, C. A.; Fellows Yates, J. A.; Salazar-García, D. C. et al.; Frohlich, B.; Aldenderfer, M.; Hoogland, M.; Read, C.; Milner, G. R.; Stone, A. C.; Lewis, C. M.; Krause, J.; Hofman, C.; Bos, K. I.; Warinner, C. G.: Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports 8 (1), 9822 (2018)

Schuenemann, V. J.; Lankapalli, A. K.; Barquera, R.; Nelson, E. A.; Iraíz Hernández, D.; Acuña Alonzo, V.; Bos, K. I.; Márquez Morfín, L.; Herbig, A.; Krause, J.: Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains. PLOS Neglected Tropical Diseases 12 (6), e0006447 (2018)

Spyrou, M. A.; Tukhbatova, R. I.; Wang, C.-C.; Andrades Valtueña, A.; Lankapalli, A. K.; Kondrashin, V. V.; Tsybin, V. A.; Khokhlov, A.; Kühnert, D.; Herbig, A. et al.; Bos, K. I.; Krause, J.: Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague. Nature Communications 9, 2234 (2018)

Vågene, Å. J.; Herbig, A.; Campana, M. G.; García, R.; M., N.; Warinner, C.; Sabin, S.; Spyrou, M. A.; Andrades Valtueña, A.; Huson, D. et al.; Tuross, N.; Bos, K. I.; Krause, J.: Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico. Nature Ecology & Evolution 2 (3), pp. 520 - 528 (2018)

Spyrou, M. A.; Bos, K. I.: Tracking Ancient Plagues. Natural History 125 (9), pp. 18 - 20 (2017)

Key, F. M.; Posth, C.; Krause, J.; Herbig, A.; Bos, K. I.: Mining metagenomic data sets for ancient DNA: Recommended protocols for authentication. Trends in Genetics 33 (8), pp. 508 - 520 (2017)

Andrades Valtueña, A.; Mittnik, A.; Key, F. M.; Haak, W.; Allmäe, R.; Belinskij, A.; Daubaras, M.; Feldman, M.; Jankauskas, R.; Janković, I. et al.; Massy, K.; Novak, M.; Pfrengle, S.; Reinhold, S.; Šlaus, M.; Spyrou, M. A.; Szécsényi-Nagy, A.; Tõrv, M.; Hansen, S.; Bos, K. I.; Stockhammer, P. W.; Herbig, A.; Krause, J.: The Stone Age plague and its persistence in Eurasia. Current Biology 27 (23), pp. 3683 - 3691 (2017)

Arora, N.; Schuenemann, V. J.; Jäger, G.; Peltzer, A.; Seitz, A.; Herbig, A.; Strouhal, M.; Grillová, L.; Sánchez-Busó, L.; Kühnert, D. et al.; Bos, K. I.; Davis, L. R.; Mikalová, L.; Bruisten, S.; Komericki, P.; French, P.; Grant, P. R.; Pando, M. A.; Vaulet, L. G.; Fermepin, M. R.; Martinez, A.; Centurion Lara, A.; Giacani, L.; Norris, S. J.; Šmajs, D.; Bosshard, P. P.; González-Candelas, F.; Nieselt, K.; Krause, J.; Bagheri, H. C.: Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster. Nature Microbiology 2, 16245 (2016)

Feldman, M.; Harbeck, M.; Keller, M.; Spyrou, M. A.; Rott, A.; Trautmann, B.; Scholz, H. C.; Päffgen, B.; Peters, J.; McCormick, M. et al.; Bos, K. I.; Herbig, A.; Krause, J.: A high-coverage Yersinia pestis genome from a 6th-century Justinianic plague victim. Molecular Biology and Evolution 33 (11), pp. 2911 - 2923 (2016)

Immel, A.; Le Cabec, A.; Bonazzi, M.; Herbig, A.; Temming, H.; Schuenemann, V. J.; Bos, K. I.; Langbein, F.; Harvati, K.; Bridault, A. et al.; Pion, G.; Julien, M.-A.; Krotova, O.; Conard, N. J.; Münzel, S. C.; Drucker, D. G.; Viola, B.; Hublin, J.-J.; Tafforeau, P.; Krause, J.: Effect of X-ray irradiation on ancient DNA in sub-fossil bones: guidelines for safe X-ray imaging. Scientific Reports 6, 32969 (2016)

Bos, K.; Herbig, A.; Sahl, J.; Waglechner, N.; Fourment, M.; Forrest, S. A.; Klunk, J.; Schuenemann, V. J.; Poinar, D.; Kuch, M. et al.; Golding, G. B.; Dutour, O.; Keim, P.; Wagner, D. M.; Holmes, E. C.; Krause, J.; Poinar, H. N.: Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus. eLife 5, e12994 (2016)

Bos, K. I.; Jaeger, G.; Schuenemann, V. J.; Vågene, Å. J.; Spyrou, M. A.; Herbig, A.; Nieselt, K.; Krause, J.: Parallel detection of ancient pathogens via array-based DNA capture. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 370 (1660), 20130375, pp. 1 - 5 (2015)

Harkins, K. M.; Buikstra, J. E.; Campbell, T.; Bos, K. I.; Johnson, E. D.; Krause, J.; Stone, A. C.: Screening ancient tuberculosis with qPCR: challenges and opportunities. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 370 (1660), 20130622, pp. 1 - 10 (2015)

Devault, A. M.; Golding, G. B.; Waglechner, N.; Enk, J. M.; Kuch, M.; Tien, J. H.; Shi, M.; Fisman, D. N.; Dhody, A. N.; Forrest, S. et al.; Bos, K. I.; Earn, D. J. D.; Holmes, E. C.; Poinar, H. N.: Second-pandemic strain of Vibrio cholerae from the Philadelphia cholera outbreak of 1849. The New England Journal of Medicine: NEJM / Publ. by the Massachusetts Medical Society 370 (4), pp. 334 - 340 (2014)

Bos, K. I.; Harkins, K. M.; Herbig, A.; Coscolla, M.; Weber, N.; Comas, I.; Forrest, S. A.; Bryant, J. M.; Harris, S. R.; Schuenemann, V. J. et al.; Campbell, T. J.; Majander, K.; Wilbur, A. K.; Guichon, R. A.; Steadman, D. L. W.; Cook, D. C.; Niemann, S.; Behr, M. A.; Zumarraga, M.; Bastida, R.; Huson, D.; Nieselt, K.; Young, D.; Parkhill, J.; Buikstra, J. E.; Gagneux, S.; Stone, A. C.; Krause, J.: Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature 514 (7523), 13591, pp. 494 - 497 (2014)

Schuenemann, V. J.; Singh, P.; Mendum, T. A.; Krause-Kyora, B.; Jaeger, G.; Bos, K.; Herbig, A.; Economou, C.; Benjak, A.; Busso, P. et al.; Nebel, A.; Boldsen, J. L.; Kjellstrom, A.; Wu, H.; Stewart, G. R.; Taylor, G. M.; Bauer, P.; Lee, O. Y. -.; Wu, H. H. T.; Minnikin, D. E.; Besra, G. S.; Tucker, K.; Roffey, S.; Sow, S. O.; Cole, S. T.; Nieselt, K.; Krause, J.: Genome-wide comparison of medieval and modern Mycobacterium leprae. Science 341 (6142), pp. 179 - 183 (2013)

Fu, Q.; Mittnik, A.; Johnson, P. L. F.; Bos, K. I.; Lari, M.; Bollongino, R.; Sun, C.; Giemsch, L.; Schmitz, R.; Burger, J. et al.; Ronchitelli, A. M.; Martini, F.; Cremonesi, R. G.; Svoboda, J.; Bauer, P.; Caramelli, D.; Castellano, S.; Reich, D.; Paeaebo, S.; Krause, J.: A revised timescale for human evolution based on ancient mitochondrial genomes. Current Biology 23 (7), pp. 553 - 559 (2013)

Bos, K. I.; Stevens, P.; Nieselt, K.; Poinar, H. N.; DeWitte, S. N.; Krause, J.: Yersinia pestis: new evidence for an old infection. PLoS One 7 (11), e49803 (2012)

Bos, K. I.; Schuenemann, V. J.; Golding, G. B.; Burbano, H. A.; Waglechner, N.; Coombes, B. K.; McPhee, J. B.; DeWitte, S. N.; Meyer, M.; Schmedes, S. et al.; Wood, J.; Earn, D. J. D.; Herring, D. A.; Bauer, P.; Poinar, H. N.; Krause, J.: A draft genome of Yersinia pestis from victims of the Black Death. Nature 478 (7370), pp. 506 - 510 (2011)